Dca38721.1
Annotation
- 4-exons
- f-1
- sp|B9HUT1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_566213#GO:0005524;GO:0003676#2F0P0C
- sp|G7K3R2_MEDTR#ATP-dependent RNA helicase SUPV3L1#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g006660#GO:0005524;GO:0004386;GO:0003676#3F0P0C
- Repeat List (scaffold416)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38721.1 |
1 |
141 |
147 |
66.66 |
141 |
67 |
1e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HUT1_POPTR |
286 |
432 |
571 |
25.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38721.1 |
2 |
125 |
147 |
61.9 |
124 |
74 |
4e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G14790.1 |
297 |
420 |
571 |
21.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold416 |
Augustus |
mRNA |
179384 |
180737 |
. |
+ |
. |
ID=Dca38721.1;Parent=Dca38721 |
| scaffold416 |
Augustus |
exon |
179384 |
179546 |
. |
+ |
. |
ID=Dca38721.1.exon1;Parent=Dca38721.1 |
| scaffold416 |
Augustus |
exon |
179755 |
179867 |
. |
+ |
. |
ID=Dca38721.1.exon2;Parent=Dca38721.1 |
| scaffold416 |
Augustus |
exon |
180465 |
180545 |
. |
+ |
. |
ID=Dca38721.1.exon3;Parent=Dca38721.1 |
| scaffold416 |
Augustus |
exon |
180651 |
180737 |
. |
+ |
. |
ID=Dca38721.1.exon4;Parent=Dca38721.1 |
