Carnation DB

Dca3877.1

Annotation

11-exons
f-1
sp|D7M4Q3_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_662477#unknown#0F0P0C
AT5G26180.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:9149253-9152595 FORWARD LENGTH=567
Repeat List (scaffold114)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3877.1	2	362	400	56.75	361	53	8e-115
Target_name	Start	End	Length	Cov(%)
sp\|D7M4Q3_ARALL	35	464	514	83.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3877.1	227	365	400	22.25	139	64	1e-41
Target_name	Start	End	Length	Cov(%)
AT5G26180.1	385	519	567	23.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold114	Augus-PASA	mRNA	54708	60228	.	+	.	ID=Dca3877.1;Parent=Dca3877
scaffold114	Augus-PASA	exon	54708	54885	.	+	.	ID=Dca3877.1.exon1;Parent=Dca3877.1
scaffold114	Augustus	exon	55678	55736	.	+	.	ID=Dca3877.1.exon2;Parent=Dca3877.1
scaffold114	Augustus	exon	55900	55950	.	+	.	ID=Dca3877.1.exon3;Parent=Dca3877.1
scaffold114	Augustus	exon	56647	56788	.	+	.	ID=Dca3877.1.exon4;Parent=Dca3877.1
scaffold114	Augustus	exon	57032	57117	.	+	.	ID=Dca3877.1.exon5;Parent=Dca3877.1
scaffold114	Augustus	exon	57285	57383	.	+	.	ID=Dca3877.1.exon6;Parent=Dca3877.1
scaffold114	Augustus	exon	57500	57553	.	+	.	ID=Dca3877.1.exon7;Parent=Dca3877.1
scaffold114	Augustus	exon	58033	58114	.	+	.	ID=Dca3877.1.exon8;Parent=Dca3877.1
scaffold114	Augustus	exon	59512	59592	.	+	.	ID=Dca3877.1.exon9;Parent=Dca3877.1
scaffold114	Augustus	exon	59700	59861	.	+	.	ID=Dca3877.1.exon10;Parent=Dca3877.1
scaffold114	Augustus	exon	60020	60228	.	+	.	ID=Dca3877.1.exon11;Parent=Dca3877.1