Carnation DB

Dca38805.1

Annotation

7-exons
f-1
sp|G3CHK5_PONTR#Early flowering 5 protein#Poncirus trifoliata (Hardy orange)#unknown#GO:0006396#0F1P0C
Repeat List (scaffold4174)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38805.1	2	504	505	64.35	503	60	1e-96
Target_name	Start	End	Length	Cov(%)
sp\|G3CHK5_PONTR	1	539	540	99.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38805.1	2	121	505	19.6	120	62	4e-48
Target_name	Start	End	Length	Cov(%)
Os07t0192900-00	1	160	297	53.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4174	Augustus	mRNA	14369	21812	.	+	.	ID=Dca38805.1;Parent=Dca38805
scaffold4174	Augustus	exon	14369	14452	.	+	.	ID=Dca38805.1.exon1;Parent=Dca38805.1
scaffold4174	Augustus	exon	16238	16331	.	+	.	ID=Dca38805.1.exon2;Parent=Dca38805.1
scaffold4174	Augustus	exon	17079	17164	.	+	.	ID=Dca38805.1.exon3;Parent=Dca38805.1
scaffold4174	Augustus	exon	17975	18056	.	+	.	ID=Dca38805.1.exon4;Parent=Dca38805.1
scaffold4174	Augustus	exon	18154	18566	.	+	.	ID=Dca38805.1.exon5;Parent=Dca38805.1
scaffold4174	Augustus	exon	19686	20225	.	+	.	ID=Dca38805.1.exon6;Parent=Dca38805.1
scaffold4174	Augustus	exon	21594	21812	.	+	.	ID=Dca38805.1.exon7;Parent=Dca38805.1