Dca38813.1
Annotation
- 4-exons
- f-1
- sp|F6HCK3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0149g00120#GO:0005524;GO:0003725;GO:0004386;GO:0004525#4F0P0C
- sp|B9SC13_RICCO#Ribonuclease III, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0701500#GO:0005622;GO:0005524;GO:0008026;GO:0003725;GO:0004525;GO:0006396#4F1P1C
- Repeat List (scaffold4176)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38813.1 |
4 |
296 |
304 |
67.1 |
293 |
70 |
3e-116
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HCK3_VITVI |
563 |
850 |
1239 |
23.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38813.1 |
5 |
296 |
304 |
61.18 |
292 |
64 |
1e-105
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G20320.1 |
1036 |
1327 |
1702 |
17.15 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4176 |
Augustus |
mRNA |
14130 |
16567 |
. |
- |
. |
ID=Dca38813.1;Parent=Dca38813 |
| scaffold4176 |
Augustus |
exon |
14130 |
14621 |
. |
- |
. |
ID=Dca38813.1.exon1;Parent=Dca38813.1 |
| scaffold4176 |
Augustus |
exon |
15431 |
15640 |
. |
- |
. |
ID=Dca38813.1.exon2;Parent=Dca38813.1 |
| scaffold4176 |
Augustus |
exon |
15758 |
15963 |
. |
- |
. |
ID=Dca38813.1.exon3;Parent=Dca38813.1 |
| scaffold4176 |
Augustus |
exon |
16561 |
16567 |
. |
- |
. |
ID=Dca38813.1.exon4;Parent=Dca38813.1 |
