Dca38968.1
Annotation
- 2-exons
- f-1
- sp|B9H3A3_POPTR#High mobility group family#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=HMGA902#GO:0000786;GO:0005634;GO:0003677;GO:0006334;GO:0006355#1F2P2C
- Repeat List (scaffold42)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38968.1 |
5 |
149 |
163 |
50.3 |
145 |
47 |
2e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H3A3_POPTR |
11 |
178 |
189 |
88.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38968.1 |
1 |
150 |
163 |
47.85 |
150 |
44 |
2e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G14900.1 |
18 |
196 |
204 |
87.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold42 |
Augus-PASA |
mRNA |
171346 |
174362 |
. |
+ |
. |
ID=Dca38968.1;Parent=Dca38968 |
| scaffold42 |
Augus-PASA |
exon |
171346 |
171378 |
. |
+ |
. |
ID=Dca38968.1.exon1;Parent=Dca38968.1 |
| scaffold42 |
Augus-PASA |
exon |
173904 |
174362 |
. |
+ |
. |
ID=Dca38968.1.exon2;Parent=Dca38968.1 |
