Carnation DB

Dca38973.1

Annotation

11-exons
f-1
sp|E0CSS2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g03530#GO:0016020;GO:0017004;GO:0055114#0F2P1C
Os11t0140800-01 Similar to Cytochrome C biogenesis protein transmembrane region containing protein, expressed.
Repeat List (scaffold42)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38973.1	46	322	322	73.29	277	86	2e-129
Target_name	Start	End	Length	Cov(%)
sp\|E0CSS2_VITVI	82	358	358	77.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38973.1	4	322	322	72.04	319	73	5e-125
Target_name	Start	End	Length	Cov(%)
Os11t0140800-01	51	367	368	86.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold42	Augus-PASA	mRNA	211893	215106	.	+	.	ID=Dca38973.1;Parent=Dca38973
scaffold42	Augus-PASA	exon	211893	212007	.	+	.	ID=Dca38973.1.exon1;Parent=Dca38973.1
scaffold42	Augus-PASA	exon	212512	212567	.	+	.	ID=Dca38973.1.exon2;Parent=Dca38973.1
scaffold42	Augus-PASA	exon	212816	212946	.	+	.	ID=Dca38973.1.exon3;Parent=Dca38973.1
scaffold42	Augus-PASA	exon	213053	213138	.	+	.	ID=Dca38973.1.exon4;Parent=Dca38973.1
scaffold42	Augus-PASA	exon	213227	213258	.	+	.	ID=Dca38973.1.exon5;Parent=Dca38973.1
scaffold42	Augus-PASA	exon	213511	213672	.	+	.	ID=Dca38973.1.exon6;Parent=Dca38973.1
scaffold42	Augus-PASA	exon	213891	213963	.	+	.	ID=Dca38973.1.exon7;Parent=Dca38973.1
scaffold42	Augus-PASA	exon	214058	214158	.	+	.	ID=Dca38973.1.exon8;Parent=Dca38973.1
scaffold42	Augus-PASA	exon	214334	214426	.	+	.	ID=Dca38973.1.exon9;Parent=Dca38973.1
scaffold42	Augus-PASA	exon	214730	214776	.	+	.	ID=Dca38973.1.exon10;Parent=Dca38973.1
scaffold42	Augus-PASA	exon	215034	215106	.	+	.	ID=Dca38973.1.exon11;Parent=Dca38973.1