Dca38977.1
Annotation
- 4-exons
- f-1
- sp|B9N295_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_783911#GO:0005634;GO:0003677#1F0P1C
- sp|B6TJ26_MAIZE#ULT transcription factor#Zea mays (Maize)#unknown#unknown#0F0P0C
- Repeat List (scaffold42)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38977.1 |
162 |
387 |
411 |
26.03 |
226 |
48 |
4e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N295_POPTR |
12 |
235 |
235 |
95.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38977.1 |
162 |
385 |
411 |
25.54 |
224 |
47 |
7e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0780800-01 |
12 |
233 |
236 |
94.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold42 |
Augustus |
mRNA |
236397 |
240337 |
. |
+ |
. |
ID=Dca38977.1;Parent=Dca38977 |
| scaffold42 |
Augustus |
exon |
236397 |
236469 |
. |
+ |
. |
ID=Dca38977.1.exon1;Parent=Dca38977.1 |
| scaffold42 |
Augustus |
exon |
237598 |
238182 |
. |
+ |
. |
ID=Dca38977.1.exon2;Parent=Dca38977.1 |
| scaffold42 |
Augustus |
exon |
239665 |
239995 |
. |
+ |
. |
ID=Dca38977.1.exon3;Parent=Dca38977.1 |
| scaffold42 |
Augustus |
exon |
240091 |
240337 |
. |
+ |
. |
ID=Dca38977.1.exon4;Parent=Dca38977.1 |
