Carnation DB

Dca38987.1

Annotation

5-exons
f-1
sp|B9HZX1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_568931#unknown#0F0P0C
AT4G27450.1 | Symbols: | Aluminium induced protein with YGL and LRDR motifs | chr4:13727665-13728683 REVERSE LENGTH=250
Repeat List (scaffold42)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38987.1	123	294	361	38.5	172	81	1e-82
Target_name	Start	End	Length	Cov(%)
sp\|B9HZX1_POPTR	72	243	255	67.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38987.1	123	294	361	38.5	172	81	7e-83
Target_name	Start	End	Length	Cov(%)
AT4G27450.1	72	243	250	68.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold42	Augustus	mRNA	280381	286008	.	-	.	ID=Dca38987.1;Parent=Dca38987
scaffold42	Augustus	exon	280381	280586	.	-	.	ID=Dca38987.1.exon1;Parent=Dca38987.1
scaffold42	Augustus	exon	281835	281987	.	-	.	ID=Dca38987.1.exon2;Parent=Dca38987.1
scaffold42	Augus-PASA	exon	283330	283450	.	-	.	ID=Dca38987.1.exon3;Parent=Dca38987.1
scaffold42	Augus-PASA	exon	283839	284079	.	-	.	ID=Dca38987.1.exon4;Parent=Dca38987.1
scaffold42	Augustus	exon	285644	286008	.	-	.	ID=Dca38987.1.exon5;Parent=Dca38987.1