Carnation DB

Dca3904.1

Annotation

5-exons
f-1
sp|B9SL31_RICCO#Transcription factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0849600#GO:0043565;GO:0003700#2F0P0C
Repeat List (scaffold1140)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3904.1	70	545	546	46.52	476	49	3e-109
Target_name	Start	End	Length	Cov(%)
sp\|B9SL31_RICCO	58	557	558	89.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3904.1	123	465	546	33.69	343	48	1e-85
Target_name	Start	End	Length	Cov(%)
Os01t0826400-01	77	449	556	67.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1140	Augustus	mRNA	22127	28710	.	-	.	ID=Dca3904.1;Parent=Dca3904
scaffold1140	Augustus	exon	22127	22505	.	-	.	ID=Dca3904.1.exon1;Parent=Dca3904.1
scaffold1140	Augustus	exon	23050	23211	.	-	.	ID=Dca3904.1.exon2;Parent=Dca3904.1
scaffold1140	Augustus	exon	23320	23885	.	-	.	ID=Dca3904.1.exon3;Parent=Dca3904.1
scaffold1140	Augustus	exon	27684	27827	.	-	.	ID=Dca3904.1.exon4;Parent=Dca3904.1
scaffold1140	Augustus	exon	28321	28710	.	-	.	ID=Dca3904.1.exon5;Parent=Dca3904.1