Dca39055.1
Annotation
- 4-exons
- f-1
- sp|Q53P91_ORYSJ#Transposon protein, putative, Mutator sub-class#Oryza sativa subsp japonica (Rice)#OrderedLocusNames=LOC_Os11g07080#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold4207)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39055.1 |
10 |
350 |
383 |
29.5 |
341 |
33 |
3e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q53P91_ORYSJ |
474 |
820 |
898 |
38.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39055.1 |
33 |
336 |
383 |
25.58 |
304 |
32 |
3e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0268600-01 |
14 |
314 |
441 |
68.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4207 |
Augustus |
mRNA |
3403 |
5037 |
. |
- |
. |
ID=Dca39055.1;Parent=Dca39055 |
| scaffold4207 |
Augustus |
exon |
3403 |
4106 |
. |
- |
. |
ID=Dca39055.1.exon1;Parent=Dca39055.1 |
| scaffold4207 |
Augustus |
exon |
4189 |
4420 |
. |
- |
. |
ID=Dca39055.1.exon2;Parent=Dca39055.1 |
| scaffold4207 |
Augustus |
exon |
4625 |
4810 |
. |
- |
. |
ID=Dca39055.1.exon3;Parent=Dca39055.1 |
| scaffold4207 |
Augustus |
exon |
5008 |
5037 |
. |
- |
. |
ID=Dca39055.1.exon4;Parent=Dca39055.1 |
