Carnation DB

Dca39067.1

Annotation

13-exons
f-1
sp|F6HMP3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g01640#GO:0051539;GO:0016836;GO:0008652#2F1P0C
Os02t0125100-01 Homoaconitase/3-isopropylmalate dehydratase, small/large subunit domain containing protein.
Repeat List (scaffold421)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39067.1	3	480	485	73.6	478	75	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HMP3_VITVI	62	476	515	80.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39067.1	2	465	485	68.65	464	72	0
Target_name	Start	End	Length	Cov(%)
Os02t0125100-01	67	467	515	77.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold421	Augustus	mRNA	11768	17497	.	-	.	ID=Dca39067.1;Parent=Dca39067
scaffold421	Augustus	exon	11768	11986	.	-	.	ID=Dca39067.1.exon1;Parent=Dca39067.1
scaffold421	Augustus	exon	12063	12110	.	-	.	ID=Dca39067.1.exon2;Parent=Dca39067.1
scaffold421	Augustus	exon	12530	12661	.	-	.	ID=Dca39067.1.exon3;Parent=Dca39067.1
scaffold421	Augustus	exon	12810	12864	.	-	.	ID=Dca39067.1.exon4;Parent=Dca39067.1
scaffold421	Augustus	exon	13074	13123	.	-	.	ID=Dca39067.1.exon5;Parent=Dca39067.1
scaffold421	Augustus	exon	13421	13516	.	-	.	ID=Dca39067.1.exon6;Parent=Dca39067.1
scaffold421	Augustus	exon	13604	13681	.	-	.	ID=Dca39067.1.exon7;Parent=Dca39067.1
scaffold421	Augustus	exon	13799	13873	.	-	.	ID=Dca39067.1.exon8;Parent=Dca39067.1
scaffold421	Augustus	exon	14400	14516	.	-	.	ID=Dca39067.1.exon9;Parent=Dca39067.1
scaffold421	Augustus	exon	14600	14676	.	-	.	ID=Dca39067.1.exon10;Parent=Dca39067.1
scaffold421	Augustus	exon	15115	15448	.	-	.	ID=Dca39067.1.exon11;Parent=Dca39067.1
scaffold421	Augustus	exon	16653	16823	.	-	.	ID=Dca39067.1.exon12;Parent=Dca39067.1
scaffold421	Augustus	exon	17492	17497	.	-	.	ID=Dca39067.1.exon13;Parent=Dca39067.1