Dca39085.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold421)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39085.1 |
1 |
359 |
366 |
78.96 |
359 |
70 |
2e-161
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
891 |
1306 |
1307 |
31.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39085.1 |
44 |
350 |
366 |
31.69 |
307 |
38 |
5e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1085 |
1385 |
1401 |
21.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold421 |
Augustus |
mRNA |
148856 |
150124 |
. |
+ |
. |
ID=Dca39085.1;Parent=Dca39085 |
| scaffold421 |
Augustus |
exon |
148856 |
148982 |
. |
+ |
. |
ID=Dca39085.1.exon1;Parent=Dca39085.1 |
| scaffold421 |
Augustus |
exon |
149151 |
150124 |
. |
+ |
. |
ID=Dca39085.1.exon2;Parent=Dca39085.1 |
