Carnation DB

Dca39129.1

Annotation

5-exons
f-1
sp|E0CUJ7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0050g02520#GO:0003677;GO:0003700;GO:0016987;GO:0006352#3F1P0C
sp|B9RIL8_RICCO#RNA polymerase sigma factor rpoD, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1580440#GO:0003677;GO:0003700;GO:0016987;GO:0006352#3F1P0C
Repeat List (scaffold422)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39129.1	35	543	545	63.3	509	66	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CUJ7_VITVI	1	518	518	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39129.1	35	543	545	58.71	509	61	4e-179
Target_name	Start	End	Length	Cov(%)
AT5G24120.1	1	517	517	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold422	Augustus	mRNA	68155	70219	.	+	.	ID=Dca39129.1;Parent=Dca39129
scaffold422	Augustus	exon	68155	68940	.	+	.	ID=Dca39129.1.exon1;Parent=Dca39129.1
scaffold422	Augus-PASA	exon	69037	69183	.	+	.	ID=Dca39129.1.exon2;Parent=Dca39129.1
scaffold422	Augus-PASA	exon	69270	69506	.	+	.	ID=Dca39129.1.exon3;Parent=Dca39129.1
scaffold422	Augus-PASA	exon	69653	69916	.	+	.	ID=Dca39129.1.exon4;Parent=Dca39129.1
scaffold422	Augus-PASA	exon	70016	70219	.	+	.	ID=Dca39129.1.exon5;Parent=Dca39129.1