Carnation DB

Dca3919.1

Annotation

6-exons
f-1
sp|B9HWA4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_880253#GO:0015297;GO:0015238#2F0P0C
sp|B9T1W3_RICCO#TRANSPARENT TESTA 12 protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0275570#GO:0016020;GO:0015297;GO:0015238#2F0P1C
Repeat List (scaffold1141)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3919.1	1	76	282	19.85	76	74	2e-26
Target_name	Start	End	Length	Cov(%)
sp\|B9HWA4_POPTR	90	165	482	15.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3919.1	1	76	282	15.95	76	60	1e-23
Target_name	Start	End	Length	Cov(%)
AT1G15170.1	92	167	481	15.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1141	Augustus	mRNA	10643	13910	.	+	.	ID=Dca3919.1;Parent=Dca3919
scaffold1141	Augustus	exon	10643	10869	.	+	.	ID=Dca3919.1.exon1;Parent=Dca3919.1
scaffold1141	Augustus	exon	11261	11347	.	+	.	ID=Dca3919.1.exon2;Parent=Dca3919.1
scaffold1141	Augustus	exon	11445	11501	.	+	.	ID=Dca3919.1.exon3;Parent=Dca3919.1
scaffold1141	Augustus	exon	11602	11840	.	+	.	ID=Dca3919.1.exon4;Parent=Dca3919.1
scaffold1141	Augustus	exon	11953	12158	.	+	.	ID=Dca3919.1.exon5;Parent=Dca3919.1
scaffold1141	Augustus	exon	13878	13910	.	+	.	ID=Dca3919.1.exon6;Parent=Dca3919.1