Carnation DB

Dca39283.1

Annotation

7-exons
f-1
sp|F6HCE8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g00080#unknown#0F0P0C
Os03t0330300-03 Viral attachment protein, fibre shaft repeat containing protein.
Repeat List (scaffold4244)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39283.1	23	1040	1041	44.76	1018	43	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HCE8_VITVI	22	1090	1097	97.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39283.1	1	1041	1041	36.59	1041	34	2e-112
Target_name	Start	End	Length	Cov(%)
Os03t0330300-03	1	1067	1074	99.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4244	Augus-PASA	mRNA	17398	22617	.	-	.	ID=Dca39283.1;Parent=Dca39283
scaffold4244	Augus-PASA	exon	17398	17447	.	-	.	ID=Dca39283.1.exon1;Parent=Dca39283.1
scaffold4244	Augus-PASA	exon	17537	17605	.	-	.	ID=Dca39283.1.exon2;Parent=Dca39283.1
scaffold4244	Augustus	exon	17727	20245	.	-	.	ID=Dca39283.1.exon3;Parent=Dca39283.1
scaffold4244	Augustus	exon	20386	20538	.	-	.	ID=Dca39283.1.exon4;Parent=Dca39283.1
scaffold4244	Augustus	exon	20786	20869	.	-	.	ID=Dca39283.1.exon5;Parent=Dca39283.1
scaffold4244	Augustus	exon	20956	21138	.	-	.	ID=Dca39283.1.exon6;Parent=Dca39283.1
scaffold4244	Augustus	exon	22550	22617	.	-	.	ID=Dca39283.1.exon7;Parent=Dca39283.1