Carnation DB

Dca39344.1

Annotation

6-exons
f-1
sp|F6HZD4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g02090#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
AT1G02460.1 | Symbols: | Pectin lyase-like superfamily protein | chr1:504897-507099 REVERSE LENGTH=491
Repeat List (scaffold4256)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39344.1	58	457	457	64.55	400	74	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HZD4_VITVI	69	465	465	85.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39344.1	58	457	457	61.48	400	70	8e-173
Target_name	Start	End	Length	Cov(%)
AT1G02460.1	88	488	491	81.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4256	Augustus	mRNA	21595	23486	.	+	.	ID=Dca39344.1;Parent=Dca39344
scaffold4256	Augustus	exon	21595	21960	.	+	.	ID=Dca39344.1.exon1;Parent=Dca39344.1
scaffold4256	Augustus	exon	22037	22204	.	+	.	ID=Dca39344.1.exon2;Parent=Dca39344.1
scaffold4256	Augustus	exon	22341	22385	.	+	.	ID=Dca39344.1.exon3;Parent=Dca39344.1
scaffold4256	Augustus	exon	22459	22666	.	+	.	ID=Dca39344.1.exon4;Parent=Dca39344.1
scaffold4256	Augustus	exon	22788	22869	.	+	.	ID=Dca39344.1.exon5;Parent=Dca39344.1
scaffold4256	Augustus	exon	22982	23486	.	+	.	ID=Dca39344.1.exon6;Parent=Dca39344.1