Dca39382.1
Annotation
- 2-exons
- f-1
- sp|E5GCE2_CUCME#Ty3-gypsy retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold4263)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39382.1 |
1 |
143 |
143 |
62.93 |
143 |
59 |
2e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GCE2_CUCME |
587 |
739 |
1359 |
11.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39382.1 |
4 |
143 |
143 |
43.35 |
140 |
33 |
4e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
386 |
574 |
707 |
26.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4263 |
Augustus |
mRNA |
24262 |
24840 |
. |
- |
. |
ID=Dca39382.1;Parent=Dca39382 |
| scaffold4263 |
Augustus |
exon |
24262 |
24414 |
. |
- |
. |
ID=Dca39382.1.exon1;Parent=Dca39382.1 |
| scaffold4263 |
Augustus |
exon |
24562 |
24840 |
. |
- |
. |
ID=Dca39382.1.exon2;Parent=Dca39382.1 |
