Carnation DB

Dca39386.1

Annotation

19-exons
f-1
sp|F6I5U2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0074g00150#GO:0016746#1F0P0C
AT3G52200.2 | Symbols: LTA3 | Dihydrolipoamide acetyltransferase, long form protein | chr3:19360317-19366091 FORWARD LENGTH=713
Repeat List (scaffold4265)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39386.1	154	245	582	12.54	92	80	6e-36
Target_name	Start	End	Length	Cov(%)
sp\|F6I5U2_VITVI	78	169	636	14.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39386.1	8	582	582	58.41	575	59	3e-176
Target_name	Start	End	Length	Cov(%)
AT3G52200.2	151	713	713	78.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4265	Augustus	mRNA	10206	18243	.	+	.	ID=Dca39386.1;Parent=Dca39386
scaffold4265	Augustus	exon	10206	10292	.	+	.	ID=Dca39386.1.exon1;Parent=Dca39386.1
scaffold4265	Augustus	exon	10380	10424	.	+	.	ID=Dca39386.1.exon2;Parent=Dca39386.1
scaffold4265	Augustus	exon	10924	11045	.	+	.	ID=Dca39386.1.exon3;Parent=Dca39386.1
scaffold4265	Augustus	exon	11359	11434	.	+	.	ID=Dca39386.1.exon4;Parent=Dca39386.1
scaffold4265	Augustus	exon	12113	12298	.	+	.	ID=Dca39386.1.exon5;Parent=Dca39386.1
scaffold4265	Augustus	exon	12436	12480	.	+	.	ID=Dca39386.1.exon6;Parent=Dca39386.1
scaffold4265	Augustus	exon	12555	12628	.	+	.	ID=Dca39386.1.exon7;Parent=Dca39386.1
scaffold4265	Augustus	exon	12851	12920	.	+	.	ID=Dca39386.1.exon8;Parent=Dca39386.1
scaffold4265	Augustus	exon	13247	13627	.	+	.	ID=Dca39386.1.exon9;Parent=Dca39386.1
scaffold4265	Augus-PASA	exon	15058	15118	.	+	.	ID=Dca39386.1.exon10;Parent=Dca39386.1
scaffold4265	Augus-PASA	exon	15347	15391	.	+	.	ID=Dca39386.1.exon11;Parent=Dca39386.1
scaffold4265	Augus-PASA	exon	15478	15561	.	+	.	ID=Dca39386.1.exon12;Parent=Dca39386.1
scaffold4265	Augus-PASA	exon	16205	16281	.	+	.	ID=Dca39386.1.exon13;Parent=Dca39386.1
scaffold4265	Augus-PASA	exon	16361	16423	.	+	.	ID=Dca39386.1.exon14;Parent=Dca39386.1
scaffold4265	Augus-PASA	exon	16756	16826	.	+	.	ID=Dca39386.1.exon15;Parent=Dca39386.1
scaffold4265	Augus-PASA	exon	16910	16970	.	+	.	ID=Dca39386.1.exon16;Parent=Dca39386.1
scaffold4265	Augus-PASA	exon	17388	17448	.	+	.	ID=Dca39386.1.exon17;Parent=Dca39386.1
scaffold4265	Augus-PASA	exon	17531	17611	.	+	.	ID=Dca39386.1.exon18;Parent=Dca39386.1
scaffold4265	Augus-PASA	exon	18185	18243	.	+	.	ID=Dca39386.1.exon19;Parent=Dca39386.1