Carnation DB

Dca39561.1

Annotation

6-exons
f-1
sp|F6HCD7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g00730#GO:0016788;GO:0006629#1F1P0C
Os11t0708400-02 Similar to CPRD49.
Repeat List (scaffold4296)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39561.1	1	251	255	70.98	251	73	1e-108
Target_name	Start	End	Length	Cov(%)
sp\|F6HCD7_VITVI	73	323	328	76.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39561.1	3	254	255	69.41	252	71	2e-107
Target_name	Start	End	Length	Cov(%)
Os11t0708400-02	7	258	261	96.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4296	Augus-PASA	mRNA	3075	5855	.	+	.	ID=Dca39561.1;Parent=Dca39561
scaffold4296	Augus-PASA	exon	3075	3185	.	+	.	ID=Dca39561.1.exon1;Parent=Dca39561.1
scaffold4296	Augus-PASA	exon	4494	4571	.	+	.	ID=Dca39561.1.exon2;Parent=Dca39561.1
scaffold4296	Augus-PASA	exon	4711	4851	.	+	.	ID=Dca39561.1.exon3;Parent=Dca39561.1
scaffold4296	Augus-PASA	exon	4937	5013	.	+	.	ID=Dca39561.1.exon4;Parent=Dca39561.1
scaffold4296	Augus-PASA	exon	5102	5251	.	+	.	ID=Dca39561.1.exon5;Parent=Dca39561.1
scaffold4296	Augus-PASA	exon	5645	5855	.	+	.	ID=Dca39561.1.exon6;Parent=Dca39561.1