Carnation DB

Dca39637.1

Annotation

5-exons
f-1
sp|A9PD98_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_832191#unknown#0F0P0C
sp|B9RVS2_RICCO#Prohibitin, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1171660#GO:0016020#0F0P1C
Repeat List (scaffold43)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39637.1	1	276	290	82.41	276	86	9e-141
Target_name	Start	End	Length	Cov(%)
sp\|A9PD98_POPTR	1	279	290	96.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39637.1	1	276	290	75.86	276	79	1e-128
Target_name	Start	End	Length	Cov(%)
Os03t0841700-02	1	279	291	95.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold43	Augus-PASA	mRNA	472330	474038	.	-	.	ID=Dca39637.1;Parent=Dca39637
scaffold43	Augus-PASA	exon	472330	472533	.	-	.	ID=Dca39637.1.exon1;Parent=Dca39637.1
scaffold43	Augus-PASA	exon	472669	472881	.	-	.	ID=Dca39637.1.exon2;Parent=Dca39637.1
scaffold43	Augus-PASA	exon	473000	473170	.	-	.	ID=Dca39637.1.exon3;Parent=Dca39637.1
scaffold43	Augus-PASA	exon	473254	473370	.	-	.	ID=Dca39637.1.exon4;Parent=Dca39637.1
scaffold43	Augustus	exon	473871	474038	.	-	.	ID=Dca39637.1.exon5;Parent=Dca39637.1