Carnation DB

Dca39953.1

Annotation

6-exons
f-1
sp|F6I4I6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0060g00260#unknown#0F0P0C
Os01t0286100-01 Helix-loop-helix DNA-binding domain containing protein.
Repeat List (scaffold435)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39953.1	37	619	677	42.24	583	45	2e-106
Target_name	Start	End	Length	Cov(%)
sp\|F6I4I6_VITVI	28	657	709	88.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39953.1	247	614	677	22.74	368	42	2e-48
Target_name	Start	End	Length	Cov(%)
Os01t0286100-01	308	654	732	47.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold435	Augustus	mRNA	112408	115336	.	-	.	ID=Dca39953.1;Parent=Dca39953
scaffold435	Augustus	exon	112408	112521	.	-	.	ID=Dca39953.1.exon1;Parent=Dca39953.1
scaffold435	Augustus	exon	112978	113451	.	-	.	ID=Dca39953.1.exon2;Parent=Dca39953.1
scaffold435	Augustus	exon	113539	113604	.	-	.	ID=Dca39953.1.exon3;Parent=Dca39953.1
scaffold435	Augustus	exon	113768	113833	.	-	.	ID=Dca39953.1.exon4;Parent=Dca39953.1
scaffold435	Augustus	exon	113924	114022	.	-	.	ID=Dca39953.1.exon5;Parent=Dca39953.1
scaffold435	Augustus	exon	114122	115336	.	-	.	ID=Dca39953.1.exon6;Parent=Dca39953.1