Carnation DB

Dca40018.1

Annotation

6-exons
f-1
sp|D7SHZ2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g07530#GO:0005488;GO:0008565;GO:0006886#2F1P0C
Os10t0477800-01 Similar to Nuclear transportin.
Repeat List (scaffold4360)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40018.1	43	105	161	28.57	63	74	5e-22
Target_name	Start	End	Length	Cov(%)
sp\|D7SHZ2_VITVI	350	412	960	6.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40018.1	43	105	161	27.32	63	70	2e-21
Target_name	Start	End	Length	Cov(%)
AT5G62600.1	350	412	958	6.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4360	Augustus	mRNA	35514	38620	.	+	.	ID=Dca40018.1;Parent=Dca40018
scaffold4360	Augustus	exon	35514	35601	.	+	.	ID=Dca40018.1.exon1;Parent=Dca40018.1
scaffold4360	Augustus	exon	36206	36245	.	+	.	ID=Dca40018.1.exon2;Parent=Dca40018.1
scaffold4360	Augustus	exon	37397	37496	.	+	.	ID=Dca40018.1.exon3;Parent=Dca40018.1
scaffold4360	Augustus	exon	37871	37952	.	+	.	ID=Dca40018.1.exon4;Parent=Dca40018.1
scaffold4360	Augustus	exon	38080	38156	.	+	.	ID=Dca40018.1.exon5;Parent=Dca40018.1
scaffold4360	Augustus	exon	38522	38620	.	+	.	ID=Dca40018.1.exon6;Parent=Dca40018.1