Dca40065.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold437)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40065.1 |
172 |
464 |
465 |
41.29 |
293 |
66 |
2e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
306 |
598 |
964 |
30.39 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40065.1 |
172 |
463 |
465 |
23.01 |
292 |
32 |
3e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
704 |
1041 |
1401 |
24.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold437 |
Augustus |
mRNA |
139676 |
144127 |
. |
+ |
. |
ID=Dca40065.1;Parent=Dca40065 |
| scaffold437 |
Augustus |
exon |
139676 |
139732 |
. |
+ |
. |
ID=Dca40065.1.exon1;Parent=Dca40065.1 |
| scaffold437 |
Augustus |
exon |
141733 |
142135 |
. |
+ |
. |
ID=Dca40065.1.exon2;Parent=Dca40065.1 |
| scaffold437 |
Augustus |
exon |
143190 |
144127 |
. |
+ |
. |
ID=Dca40065.1.exon3;Parent=Dca40065.1 |
