Dca40067.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold437)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40067.1 |
1 |
214 |
308 |
53.89 |
214 |
78 |
2e-100
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
682 |
895 |
896 |
23.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40067.1 |
4 |
212 |
308 |
27.27 |
209 |
40 |
1e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1213 |
1420 |
1428 |
14.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold437 |
Augustus |
mRNA |
147277 |
149288 |
. |
+ |
. |
ID=Dca40067.1;Parent=Dca40067 |
| scaffold437 |
Augustus |
exon |
147277 |
147926 |
. |
+ |
. |
ID=Dca40067.1.exon1;Parent=Dca40067.1 |
| scaffold437 |
Augustus |
exon |
149012 |
149288 |
. |
+ |
. |
ID=Dca40067.1.exon2;Parent=Dca40067.1 |
