Dca4010.1
Annotation
- 4-exons
- f-1
- sp|A5AHH2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_032906#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1147)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4010.1 |
41 |
576 |
576 |
54.34 |
536 |
49 |
9e-170
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AHH2_VITVI |
160 |
801 |
1430 |
44.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4010.1 |
248 |
574 |
576 |
24.3 |
327 |
41 |
2e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
406 |
744 |
1428 |
23.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1147 |
Augustus |
mRNA |
53812 |
57339 |
. |
+ |
. |
ID=Dca4010.1;Parent=Dca4010 |
| scaffold1147 |
Augustus |
exon |
53812 |
53942 |
. |
+ |
. |
ID=Dca4010.1.exon1;Parent=Dca4010.1 |
| scaffold1147 |
Augustus |
exon |
55391 |
55909 |
. |
+ |
. |
ID=Dca4010.1.exon2;Parent=Dca4010.1 |
| scaffold1147 |
Augustus |
exon |
56051 |
56340 |
. |
+ |
. |
ID=Dca4010.1.exon3;Parent=Dca4010.1 |
| scaffold1147 |
Augustus |
exon |
56549 |
57339 |
. |
+ |
. |
ID=Dca4010.1.exon4;Parent=Dca4010.1 |
