Carnation DB

Dca40175.1

Annotation

9-exons
f-1
sp|E0CT47_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g05070#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
sp|B9SA06_RICCO#Kinesin, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0181420#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
Repeat List (scaffold4391)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40175.1	2	371	371	84.9	370	84	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CT47_VITVI	389	763	763	49.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40175.1	2	371	371	81.13	370	81	2e-179
Target_name	Start	End	Length	Cov(%)
AT5G54670.1	382	754	754	49.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4391	Augustus	mRNA	5635	7798	.	+	.	ID=Dca40175.1;Parent=Dca40175
scaffold4391	Augustus	exon	5635	5667	.	+	.	ID=Dca40175.1.exon1;Parent=Dca40175.1
scaffold4391	Augustus	exon	5748	5880	.	+	.	ID=Dca40175.1.exon2;Parent=Dca40175.1
scaffold4391	Augustus	exon	6042	6151	.	+	.	ID=Dca40175.1.exon3;Parent=Dca40175.1
scaffold4391	Augus-PASA	exon	6312	6473	.	+	.	ID=Dca40175.1.exon4;Parent=Dca40175.1
scaffold4391	Augus-PASA	exon	6606	6808	.	+	.	ID=Dca40175.1.exon5;Parent=Dca40175.1
scaffold4391	Augus-PASA	exon	6993	7074	.	+	.	ID=Dca40175.1.exon6;Parent=Dca40175.1
scaffold4391	Augus-PASA	exon	7171	7275	.	+	.	ID=Dca40175.1.exon7;Parent=Dca40175.1
scaffold4391	Augus-PASA	exon	7373	7477	.	+	.	ID=Dca40175.1.exon8;Parent=Dca40175.1
scaffold4391	Augus-PASA	exon	7616	7798	.	+	.	ID=Dca40175.1.exon9;Parent=Dca40175.1