Carnation DB

Dca40245.1

Annotation

6-exons
f-1
sp|D7MBM0_ARALL#40S ribosomal protein S11#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_491674#GO:0005840;GO:0003735;GO:0006412#1F1P1C
Repeat List (scaffold44)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40245.1	1	159	159	89.93	159	90	8e-81
Target_name	Start	End	Length	Cov(%)
sp\|D7MBM0_ARALL	1	159	159	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40245.1	1	159	159	88.67	159	89	8e-74
Target_name	Start	End	Length	Cov(%)
AT5G23740.1	1	159	159	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold44	Augus-PASA	mRNA	310319	311934	.	-	.	ID=Dca40245.1;Parent=Dca40245
scaffold44	Augus-PASA	exon	310319	310409	.	-	.	ID=Dca40245.1.exon1;Parent=Dca40245.1
scaffold44	Augus-PASA	exon	310507	310596	.	-	.	ID=Dca40245.1.exon2;Parent=Dca40245.1
scaffold44	Augus-PASA	exon	310731	310875	.	-	.	ID=Dca40245.1.exon3;Parent=Dca40245.1
scaffold44	Augus-PASA	exon	311503	311603	.	-	.	ID=Dca40245.1.exon4;Parent=Dca40245.1
scaffold44	Augus-PASA	exon	311763	311803	.	-	.	ID=Dca40245.1.exon5;Parent=Dca40245.1
scaffold44	Augus-PASA	exon	311923	311934	.	-	.	ID=Dca40245.1.exon6;Parent=Dca40245.1