Dca4025.1
Annotation
- 3-exons
- f-1
- sp|Q53JE1_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class#Oryza sativa subsp japonica (Rice)#OrderedLocusNames=LOC_Os11g26320#unknown#0F0P0C
- Repeat List (scaffold1148)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4025.1 |
131 |
470 |
470 |
36.8 |
340 |
48 |
8e-87
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q53JE1_ORYSJ |
1 |
363 |
1044 |
34.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4025.1 |
131 |
459 |
470 |
28.51 |
329 |
38 |
2e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0271500-01 |
1 |
334 |
349 |
95.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1148 |
Augustus |
mRNA |
61314 |
65406 |
. |
+ |
. |
ID=Dca4025.1;Parent=Dca4025 |
| scaffold1148 |
Augustus |
exon |
61314 |
61434 |
. |
+ |
. |
ID=Dca4025.1.exon1;Parent=Dca4025.1 |
| scaffold1148 |
Augustus |
exon |
62966 |
63232 |
. |
+ |
. |
ID=Dca4025.1.exon2;Parent=Dca4025.1 |
| scaffold1148 |
Augustus |
exon |
64382 |
65406 |
. |
+ |
. |
ID=Dca4025.1.exon3;Parent=Dca4025.1 |
