Carnation DB

Dca40288.1

Annotation

8-exons
f-1
sp|F6HKF1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g04400#GO:0005524;GO:0008026;GO:0003676#3F0P0C
sp|D6N3H0_GOSHI#RNA helicase-like protein#Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)#unknown#GO:0005524;GO:0008026;GO:0003676#3F0P0C
Repeat List (scaffold4404)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40288.1	17	469	485	68.65	453	73	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HKF1_VITVI	6	459	513	88.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40288.1	6	485	485	64.32	480	65	2e-179
Target_name	Start	End	Length	Cov(%)
AT3G53110.1	22	494	496	95.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4404	Augustus	mRNA	3854	9449	.	+	.	ID=Dca40288.1;Parent=Dca40288
scaffold4404	Augustus	exon	3854	4057	.	+	.	ID=Dca40288.1.exon1;Parent=Dca40288.1
scaffold4404	Augustus	exon	4676	4969	.	+	.	ID=Dca40288.1.exon2;Parent=Dca40288.1
scaffold4404	Augustus	exon	5066	5299	.	+	.	ID=Dca40288.1.exon3;Parent=Dca40288.1
scaffold4404	Augustus	exon	6098	6163	.	+	.	ID=Dca40288.1.exon4;Parent=Dca40288.1
scaffold4404	Augustus	exon	6432	6833	.	+	.	ID=Dca40288.1.exon5;Parent=Dca40288.1
scaffold4404	Augustus	exon	6915	7023	.	+	.	ID=Dca40288.1.exon6;Parent=Dca40288.1
scaffold4404	Augustus	exon	8569	8654	.	+	.	ID=Dca40288.1.exon7;Parent=Dca40288.1
scaffold4404	Augustus	exon	9387	9449	.	+	.	ID=Dca40288.1.exon8;Parent=Dca40288.1