Carnation DB

Dca40412.1

Annotation

6-exons
f-1
sp|B9MYZ9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_293916#GO:0005524;GO:0004674#2F0P0C
sp|B9SMD4_RICCO#Serine/threonine-protein kinase cx32, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0513180#GO:0005524;GO:0004715;GO:0004674#3F0P0C
Repeat List (scaffold4427)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40412.1	4	364	394	70.05	361	75	5e-157
Target_name	Start	End	Length	Cov(%)
sp\|B9MYZ9_POPTR	17	384	384	95.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40412.1	26	381	394	60.4	356	67	1e-142
Target_name	Start	End	Length	Cov(%)
AT2G17220.1	45	399	414	85.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4427	Augus-PASA	mRNA	867	3956	.	+	.	ID=Dca40412.1;Parent=Dca40412
scaffold4427	Augus-PASA	exon	867	897	.	+	.	ID=Dca40412.1.exon1;Parent=Dca40412.1
scaffold4427	Augus-PASA	exon	1876	2204	.	+	.	ID=Dca40412.1.exon2;Parent=Dca40412.1
scaffold4427	Augus-PASA	exon	2814	2949	.	+	.	ID=Dca40412.1.exon3;Parent=Dca40412.1
scaffold4427	Augus-PASA	exon	3029	3171	.	+	.	ID=Dca40412.1.exon4;Parent=Dca40412.1
scaffold4427	Augus-PASA	exon	3256	3379	.	+	.	ID=Dca40412.1.exon5;Parent=Dca40412.1
scaffold4427	Augus-PASA	exon	3535	3956	.	+	.	ID=Dca40412.1.exon6;Parent=Dca40412.1