Dca40611.1
Annotation
- 3-exons
- f-3
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4457)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40611.1 |
110 |
248 |
253 |
34.38 |
139 |
50 |
3e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
54 |
227 |
964 |
18.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40611.1 |
155 |
248 |
253 |
14.62 |
94 |
40 |
1e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
548 |
641 |
1428 |
6.58 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4457 |
Augustus |
mRNA |
1 |
1235 |
. |
+ |
. |
ID=Dca40611.1;Parent=Dca40611 |
| scaffold4457 |
Augustus |
exon |
1 |
321 |
. |
+ |
. |
ID=Dca40611.1.exon1;Parent=Dca40611.1 |
| scaffold4457 |
Augustus |
exon |
688 |
795 |
. |
+ |
. |
ID=Dca40611.1.exon2;Parent=Dca40611.1 |
| scaffold4457 |
Augustus |
exon |
901 |
1235 |
. |
+ |
. |
ID=Dca40611.1.exon3;Parent=Dca40611.1 |
