Carnation DB

Dca40816.1

Annotation

8-exons
f-1
sp|D7T1L9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0009g01000#GO:0008270#1F0P0C
AT5G22000.2 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-7279553 FORWARD LENGTH=375
Repeat List (scaffold449)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40816.1	8	386	389	63.75	379	64	8e-126
Target_name	Start	End	Length	Cov(%)
sp\|D7T1L9_VITVI	6	390	393	97.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40816.1	16	388	389	58.09	373	61	1e-118
Target_name	Start	End	Length	Cov(%)
AT5G22000.2	11	374	375	97.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold449	Augustus	mRNA	23261	26346	.	-	.	ID=Dca40816.1;Parent=Dca40816
scaffold449	Augustus	exon	23261	23570	.	-	.	ID=Dca40816.1.exon1;Parent=Dca40816.1
scaffold449	Augustus	exon	23693	23797	.	-	.	ID=Dca40816.1.exon2;Parent=Dca40816.1
scaffold449	Augustus	exon	23919	24298	.	-	.	ID=Dca40816.1.exon3;Parent=Dca40816.1
scaffold449	Augustus	exon	24384	24492	.	-	.	ID=Dca40816.1.exon4;Parent=Dca40816.1
scaffold449	Augustus	exon	24585	24647	.	-	.	ID=Dca40816.1.exon5;Parent=Dca40816.1
scaffold449	Augustus	exon	25737	25783	.	-	.	ID=Dca40816.1.exon6;Parent=Dca40816.1
scaffold449	Augustus	exon	25882	26031	.	-	.	ID=Dca40816.1.exon7;Parent=Dca40816.1
scaffold449	Augustus	exon	26341	26346	.	-	.	ID=Dca40816.1.exon8;Parent=Dca40816.1