Carnation DB

Dca40908.1

Annotation

18-exons
f-1
sp|D7SHP0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g08750#GO:0005524#1F0P0C
AT1G19100.1 | Symbols: | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein | chr1:6595560-6601159 FORWARD LENGTH=663
Repeat List (scaffold45)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40908.1	41	633	644	55.74	593	56	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SHP0_VITVI	56	699	709	90.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40908.1	42	633	644	52.17	592	54	0
Target_name	Start	End	Length	Cov(%)
AT1G19100.1	41	647	663	91.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold45	Augus-PASA	mRNA	352304	358532	.	+	.	ID=Dca40908.1;Parent=Dca40908
scaffold45	Augus-PASA	exon	352304	352616	.	+	.	ID=Dca40908.1.exon1;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	352875	352949	.	+	.	ID=Dca40908.1.exon2;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	353056	353090	.	+	.	ID=Dca40908.1.exon3;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	353296	353374	.	+	.	ID=Dca40908.1.exon4;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	353496	353585	.	+	.	ID=Dca40908.1.exon5;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	353664	353739	.	+	.	ID=Dca40908.1.exon6;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	353939	354017	.	+	.	ID=Dca40908.1.exon7;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	354113	354247	.	+	.	ID=Dca40908.1.exon8;Parent=Dca40908.1
scaffold45	Augustus	exon	354707	354805	.	+	.	ID=Dca40908.1.exon9;Parent=Dca40908.1
scaffold45	Augustus	exon	355073	355219	.	+	.	ID=Dca40908.1.exon10;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	355479	355571	.	+	.	ID=Dca40908.1.exon11;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	356002	356053	.	+	.	ID=Dca40908.1.exon12;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	356128	356239	.	+	.	ID=Dca40908.1.exon13;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	356726	356943	.	+	.	ID=Dca40908.1.exon14;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	357028	357134	.	+	.	ID=Dca40908.1.exon15;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	357750	357829	.	+	.	ID=Dca40908.1.exon16;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	358030	358072	.	+	.	ID=Dca40908.1.exon17;Parent=Dca40908.1
scaffold45	Augus-PASA	exon	358431	358532	.	+	.	ID=Dca40908.1.exon18;Parent=Dca40908.1