Carnation DB

Dca41122.1

Annotation

5-exons
f-1
sp|D7U143_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g07070#GO:0005681;GO:0000398#0F1P1C
AT1G80070.1 | Symbols: SUS2, EMB33, EMB177, EMB14 | Pre-mRNA-processing-splicing factor | chr1:30118052-30127574 FORWARD LENGTH=2359
Repeat List (scaffold4536)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41122.1	343	396	429	11.18	54	83	2e-19
Target_name	Start	End	Length	Cov(%)
sp\|D7U143_VITVI	18	75	2347	2.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41122.1	366	396	429	7.22	31	100	3e-12
Target_name	Start	End	Length	Cov(%)
AT1G80070.1	59	89	2359	1.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4536	Augustus	mRNA	99	3035	.	-	.	ID=Dca41122.1;Parent=Dca41122
scaffold4536	Augustus	exon	99	199	.	-	.	ID=Dca41122.1.exon1;Parent=Dca41122.1
scaffold4536	Augustus	exon	389	587	.	-	.	ID=Dca41122.1.exon2;Parent=Dca41122.1
scaffold4536	Augustus	exon	697	787	.	-	.	ID=Dca41122.1.exon3;Parent=Dca41122.1
scaffold4536	Augustus	exon	1276	1883	.	-	.	ID=Dca41122.1.exon4;Parent=Dca41122.1
scaffold4536	Augustus	exon	2746	3035	.	-	.	ID=Dca41122.1.exon5;Parent=Dca41122.1