Carnation DB

Dca41186.1

Annotation

6-exons
f-1
sp|B9RLT3_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1470600#GO:0006355#0F1P0C
Repeat List (scaffold455)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41186.1	5	380	413	51.33	376	56	4e-91
Target_name	Start	End	Length	Cov(%)
sp\|B9RLT3_RICCO	57	415	440	81.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41186.1	5	270	413	26.15	266	40	2e-35
Target_name	Start	End	Length	Cov(%)
AT4G00050.1	33	274	399	60.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold455	Augustus	mRNA	62687	64753	.	-	.	ID=Dca41186.1;Parent=Dca41186
scaffold455	Augustus	exon	62687	62790	.	-	.	ID=Dca41186.1.exon1;Parent=Dca41186.1
scaffold455	Augustus	exon	62921	63335	.	-	.	ID=Dca41186.1.exon2;Parent=Dca41186.1
scaffold455	Augustus	exon	63544	63609	.	-	.	ID=Dca41186.1.exon3;Parent=Dca41186.1
scaffold455	Augustus	exon	63696	63794	.	-	.	ID=Dca41186.1.exon4;Parent=Dca41186.1
scaffold455	Augustus	exon	63983	64532	.	-	.	ID=Dca41186.1.exon5;Parent=Dca41186.1
scaffold455	Augustus	exon	64746	64753	.	-	.	ID=Dca41186.1.exon6;Parent=Dca41186.1