Dca41258.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4567)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41258.1 |
1 |
62 |
62 |
69.35 |
62 |
70 |
3e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q949K9_CICAR |
360 |
421 |
655 |
9.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41258.1 |
1 |
52 |
62 |
37.09 |
52 |
45 |
8e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1096 |
1147 |
1539 |
3.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4567 |
Augustus |
mRNA |
20138 |
23670 |
. |
- |
. |
ID=Dca41258.1;Parent=Dca41258 |
| scaffold4567 |
Augustus |
exon |
20138 |
20837 |
. |
- |
. |
ID=Dca41258.1.exon1;Parent=Dca41258.1 |
| scaffold4567 |
Augustus |
exon |
20966 |
23670 |
. |
- |
. |
ID=Dca41258.1.exon2;Parent=Dca41258.1 |
