Dca41478.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold460)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41478.1 |
1 |
465 |
465 |
71.18 |
465 |
67 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
496 |
989 |
1501 |
32.91 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41478.1 |
25 |
450 |
465 |
39.78 |
426 |
41 |
6e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
555 |
1000 |
1539 |
28.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold460 |
Augustus |
mRNA |
66589 |
68060 |
. |
+ |
. |
ID=Dca41478.1;Parent=Dca41478 |
| scaffold460 |
Augustus |
exon |
66589 |
67321 |
. |
+ |
. |
ID=Dca41478.1.exon1;Parent=Dca41478.1 |
| scaffold460 |
Augustus |
exon |
67396 |
68060 |
. |
+ |
. |
ID=Dca41478.1.exon2;Parent=Dca41478.1 |
