Carnation DB

Dca41807.1

Annotation

8-exons
f-1
sp|F6GT62_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g06510#GO:0005622;GO:0004527;GO:0003676#2F0P1C
sp|B9RLV8_RICCO#Exonuclease, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1471250#GO:0005622;GO:0004527;GO:0003676#2F0P1C
Repeat List (scaffold466)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41807.1	456	639	640	15.31	184	52	2e-49
Target_name	Start	End	Length	Cov(%)
sp\|F6GT62_VITVI	307	496	497	38.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41807.1	426	639	640	16.4	214	46	4e-44
Target_name	Start	End	Length	Cov(%)
AT5G07710.1	237	468	468	49.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold466	Augus-PASA	mRNA	102367	105915	.	+	.	ID=Dca41807.1;Parent=Dca41807
scaffold466	Augus-PASA	exon	102367	102643	.	+	.	ID=Dca41807.1.exon1;Parent=Dca41807.1
scaffold466	Augus-PASA	exon	103290	103447	.	+	.	ID=Dca41807.1.exon2;Parent=Dca41807.1
scaffold466	Augus-PASA	exon	103748	103794	.	+	.	ID=Dca41807.1.exon3;Parent=Dca41807.1
scaffold466	Augus-PASA	exon	104033	104096	.	+	.	ID=Dca41807.1.exon4;Parent=Dca41807.1
scaffold466	Augustus	exon	104275	104861	.	+	.	ID=Dca41807.1.exon5;Parent=Dca41807.1
scaffold466	Augustus	exon	104948	105042	.	+	.	ID=Dca41807.1.exon6;Parent=Dca41807.1
scaffold466	Augustus	exon	105135	105591	.	+	.	ID=Dca41807.1.exon7;Parent=Dca41807.1
scaffold466	Augus-PASA	exon	105678	105915	.	+	.	ID=Dca41807.1.exon8;Parent=Dca41807.1