Dca41919.1
Annotation
- 3-exons
- f-1
- sp|Q9SJP0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g15410#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4682)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41919.1 |
152 |
534 |
826 |
15.13 |
383 |
32 |
1e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SJP0_ARATH |
614 |
947 |
1787 |
18.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41919.1 |
551 |
825 |
826 |
9.92 |
275 |
30 |
5e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
7 |
280 |
591 |
46.36 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4682 |
Augustus |
mRNA |
1 |
3647 |
. |
- |
. |
ID=Dca41919.1;Parent=Dca41919 |
| scaffold4682 |
Augustus |
exon |
1 |
1550 |
. |
- |
. |
ID=Dca41919.1.exon1;Parent=Dca41919.1 |
| scaffold4682 |
Augustus |
exon |
1641 |
2182 |
. |
- |
. |
ID=Dca41919.1.exon2;Parent=Dca41919.1 |
| scaffold4682 |
Augustus |
exon |
3262 |
3647 |
. |
- |
. |
ID=Dca41919.1.exon3;Parent=Dca41919.1 |
