Carnation DB

Dca41972.1

Annotation

12-exons
f-1
sp|E0CV20_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0050g00450#GO:0003677;GO:0003899#2F0P0C
sp|B9R9A5_RICCO#DNA-directed RNA polymerase III 62 kDa polypeptide, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1495680#GO:0003677;GO:0003899#2F0P0C
Repeat List (scaffold4692)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41972.1	1	437	439	49.65	437	49	4e-103
Target_name	Start	End	Length	Cov(%)
sp\|E0CV20_VITVI	86	524	524	83.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41972.1	1	437	439	38.72	437	38	7e-78
Target_name	Start	End	Length	Cov(%)
AT3G49000.1	87	523	523	83.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4692	Augustus	mRNA	23944	29422	.	-	.	ID=Dca41972.1;Parent=Dca41972
scaffold4692	Augustus	exon	23944	24093	.	-	.	ID=Dca41972.1.exon1;Parent=Dca41972.1
scaffold4692	Augustus	exon	25161	25313	.	-	.	ID=Dca41972.1.exon2;Parent=Dca41972.1
scaffold4692	Augustus	exon	25968	26051	.	-	.	ID=Dca41972.1.exon3;Parent=Dca41972.1
scaffold4692	Augustus	exon	26430	26519	.	-	.	ID=Dca41972.1.exon4;Parent=Dca41972.1
scaffold4692	Augustus	exon	26601	26638	.	-	.	ID=Dca41972.1.exon5;Parent=Dca41972.1
scaffold4692	Augustus	exon	26735	26869	.	-	.	ID=Dca41972.1.exon6;Parent=Dca41972.1
scaffold4692	Augustus	exon	27512	27605	.	-	.	ID=Dca41972.1.exon7;Parent=Dca41972.1
scaffold4692	Augustus	exon	27682	27792	.	-	.	ID=Dca41972.1.exon8;Parent=Dca41972.1
scaffold4692	Augustus	exon	27876	28028	.	-	.	ID=Dca41972.1.exon9;Parent=Dca41972.1
scaffold4692	Augustus	exon	28683	28825	.	-	.	ID=Dca41972.1.exon10;Parent=Dca41972.1
scaffold4692	Augustus	exon	29138	29225	.	-	.	ID=Dca41972.1.exon11;Parent=Dca41972.1
scaffold4692	Augustus	exon	29342	29422	.	-	.	ID=Dca41972.1.exon12;Parent=Dca41972.1