Dca41999.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4698)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41999.1 |
70 |
217 |
217 |
34.56 |
148 |
45 |
3e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
950 |
1118 |
1501 |
11.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41999.1 |
159 |
217 |
217 |
14.74 |
59 |
55 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0375700-01 |
2 |
60 |
73 |
80.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4698 |
Augustus |
mRNA |
12387 |
13652 |
. |
- |
. |
ID=Dca41999.1;Parent=Dca41999 |
| scaffold4698 |
Augustus |
exon |
12387 |
12671 |
. |
- |
. |
ID=Dca41999.1.exon1;Parent=Dca41999.1 |
| scaffold4698 |
Augustus |
exon |
12726 |
12869 |
. |
- |
. |
ID=Dca41999.1.exon2;Parent=Dca41999.1 |
| scaffold4698 |
Augustus |
exon |
13428 |
13652 |
. |
- |
. |
ID=Dca41999.1.exon3;Parent=Dca41999.1 |
