Carnation DB

Dca42027.1

Annotation

12-exons
f-1
sp|F6HKH7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g03910#GO:0005524;GO:0004674#2F0P0C
sp|B9SRG7_RICCO#Map3k delta-1 protein kinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0382890#GO:0005524;GO:0004709#2F0P0C
Repeat List (scaffold47)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42027.1	560	698	698	14.46	139	73	4e-55
Target_name	Start	End	Length	Cov(%)
sp\|F6HKH7_VITVI	717	855	856	16.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42027.1	560	690	698	14.61	131	77	3e-55
Target_name	Start	End	Length	Cov(%)
AT5G03730.2	686	819	821	16.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold47	Augustus	mRNA	218015	228796	.	+	.	ID=Dca42027.1;Parent=Dca42027
scaffold47	Augustus	exon	218015	218512	.	+	.	ID=Dca42027.1.exon1;Parent=Dca42027.1
scaffold47	Augustus	exon	219708	220009	.	+	.	ID=Dca42027.1.exon2;Parent=Dca42027.1
scaffold47	Augustus	exon	220108	220252	.	+	.	ID=Dca42027.1.exon3;Parent=Dca42027.1
scaffold47	Augustus	exon	220739	220842	.	+	.	ID=Dca42027.1.exon4;Parent=Dca42027.1
scaffold47	Augustus	exon	222491	222699	.	+	.	ID=Dca42027.1.exon5;Parent=Dca42027.1
scaffold47	Augustus	exon	224570	224896	.	+	.	ID=Dca42027.1.exon6;Parent=Dca42027.1
scaffold47	Augustus	exon	225098	225138	.	+	.	ID=Dca42027.1.exon7;Parent=Dca42027.1
scaffold47	Augustus	exon	225675	225743	.	+	.	ID=Dca42027.1.exon8;Parent=Dca42027.1
scaffold47	Augustus	exon	226674	226742	.	+	.	ID=Dca42027.1.exon9;Parent=Dca42027.1
scaffold47	PASA	exon	226849	226980	.	+	.	ID=Dca42027.1.exon10;Parent=Dca42027.1
scaffold47	Augus-PASA	exon	228515	228609	.	+	.	ID=Dca42027.1.exon11;Parent=Dca42027.1
scaffold47	Augustus	exon	228691	228796	.	+	.	ID=Dca42027.1.exon12;Parent=Dca42027.1