Dca42058.1
Annotation
- 3-exons
- f-1
- sp|Q9ZQ67_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g14380#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold470)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42058.1 |
2 |
245 |
245 |
49.79 |
244 |
50 |
2e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQ67_ARATH |
359 |
581 |
764 |
29.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42058.1 |
4 |
117 |
245 |
16.32 |
114 |
34 |
6e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0439900-01 |
195 |
312 |
421 |
28.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold470 |
Augustus |
mRNA |
34018 |
34931 |
. |
- |
. |
ID=Dca42058.1;Parent=Dca42058 |
| scaffold470 |
Augustus |
exon |
34018 |
34299 |
. |
- |
. |
ID=Dca42058.1.exon1;Parent=Dca42058.1 |
| scaffold470 |
Augustus |
exon |
34404 |
34468 |
. |
- |
. |
ID=Dca42058.1.exon2;Parent=Dca42058.1 |
| scaffold470 |
Augustus |
exon |
34541 |
34931 |
. |
- |
. |
ID=Dca42058.1.exon3;Parent=Dca42058.1 |
