Carnation DB

Dca42063.1

Annotation

7-exons
f-1
sp|F6HEG4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0039g02270#unknown#0F0P0C
AT5G17070.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:5613514-5616088 REVERSE LENGTH=277
Repeat List (scaffold470)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42063.1	8	277	289	44.98	270	48	3e-51
Target_name	Start	End	Length	Cov(%)
sp\|F6HEG4_VITVI	74	300	303	74.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42063.1	33	159	289	29.06	127	67	5e-41
Target_name	Start	End	Length	Cov(%)
AT5G17070.1	56	182	277	45.84

seqname	source	feature	start	end	score	strand	frame	group
scaffold470	Augustus	mRNA	86312	92239	.	+	.	ID=Dca42063.1;Parent=Dca42063
scaffold470	Augustus	exon	86312	86388	.	+	.	ID=Dca42063.1.exon1;Parent=Dca42063.1
scaffold470	Augustus	exon	88627	88707	.	+	.	ID=Dca42063.1.exon2;Parent=Dca42063.1
scaffold470	Augustus	exon	89028	89076	.	+	.	ID=Dca42063.1.exon3;Parent=Dca42063.1
scaffold470	Augus-PASA	exon	89209	89305	.	+	.	ID=Dca42063.1.exon4;Parent=Dca42063.1
scaffold470	Augus-PASA	exon	89689	89741	.	+	.	ID=Dca42063.1.exon5;Parent=Dca42063.1
scaffold470	Augus-PASA	exon	90954	91016	.	+	.	ID=Dca42063.1.exon6;Parent=Dca42063.1
scaffold470	Augus-PASA	exon	91790	92239	.	+	.	ID=Dca42063.1.exon7;Parent=Dca42063.1