Carnation DB

Dca42097.1

Annotation

5-exons
f-1
sp|Q8S941_SILLA#Gag protein#Silene latifolia (White campion) (Bladder campion)#Name=MS4a#unknown#0F0P0C
Repeat List (scaffold4708)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42097.1	84	200	544	10.66	117	50	1e-29
Target_name	Start	End	Length	Cov(%)
sp\|Q8S941_SILLA	79	195	196	59.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42097.1	433	511	544	5.51	79	38	4e-09
Target_name	Start	End	Length	Cov(%)
Os03t0439900-01	162	241	421	19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4708	Augustus	mRNA	18273	20265	.	+	.	ID=Dca42097.1;Parent=Dca42097
scaffold4708	Augustus	exon	18273	18411	.	+	.	ID=Dca42097.1.exon1;Parent=Dca42097.1
scaffold4708	Augustus	exon	18487	19086	.	+	.	ID=Dca42097.1.exon2;Parent=Dca42097.1
scaffold4708	Augustus	exon	19186	19501	.	+	.	ID=Dca42097.1.exon3;Parent=Dca42097.1
scaffold4708	Augustus	exon	19583	20097	.	+	.	ID=Dca42097.1.exon4;Parent=Dca42097.1
scaffold4708	Augustus	exon	20201	20265	.	+	.	ID=Dca42097.1.exon5;Parent=Dca42097.1