Dca42108.1
Annotation
- 1-exons
- r-178
- sp|B9GI84_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1069712#GO:0005622;GO:0003676;GO:0008270#2F0P1C
- sp|O65150_TOBAC#Osmotic stress-induced zinc-finger protein#Nicotiana tabacum (Common tobacco)#Name=zfp#GO:0005622;GO:0003676;GO:0008270#2F0P1C
- Repeat List (scaffold471)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42108.1 |
23 |
236 |
240 |
44.16 |
214 |
49 |
3e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GI84_POPTR |
23 |
225 |
240 |
84.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42108.1 |
22 |
240 |
240 |
41.25 |
219 |
45 |
1e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G27730.1 |
32 |
221 |
227 |
83.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold471 |
Augus-PASA |
mRNA |
54873 |
55798 |
. |
+ |
. |
ID=Dca42108.1;Parent=Dca42108 |
| scaffold471 |
Augus-PASA |
exon |
54873 |
55798 |
. |
+ |
. |
ID=Dca42108.1.exon1;Parent=Dca42108.1 |
