Carnation DB

Dca42146.1

Annotation

7-exons
f-1
sp|A9PFS0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1108163#GO:0003824#1F0P0C
sp|A6NA79_MEDTR#Protein phosphatase 2c#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g080170#GO:0003824#1F0P0C
Repeat List (scaffold4716)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42146.1	56	210	259	43.62	155	73	3e-64
Target_name	Start	End	Length	Cov(%)
sp\|A9PFS0_POPTR	160	314	493	31.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42146.1	63	210	259	36.67	148	65	4e-57
Target_name	Start	End	Length	Cov(%)
Os08t0500300-01	185	332	532	27.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4716	Augustus	mRNA	9514	17888	.	+	.	ID=Dca42146.1;Parent=Dca42146
scaffold4716	Augustus	exon	9514	9529	.	+	.	ID=Dca42146.1.exon1;Parent=Dca42146.1
scaffold4716	Augustus	exon	11657	11800	.	+	.	ID=Dca42146.1.exon2;Parent=Dca42146.1
scaffold4716	Augustus	exon	15618	15790	.	+	.	ID=Dca42146.1.exon3;Parent=Dca42146.1
scaffold4716	Augustus	exon	15913	16030	.	+	.	ID=Dca42146.1.exon4;Parent=Dca42146.1
scaffold4716	Augustus	exon	16170	16348	.	+	.	ID=Dca42146.1.exon5;Parent=Dca42146.1
scaffold4716	Augustus	exon	16890	16930	.	+	.	ID=Dca42146.1.exon6;Parent=Dca42146.1
scaffold4716	Augustus	exon	17780	17888	.	+	.	ID=Dca42146.1.exon7;Parent=Dca42146.1