Carnation DB

Dca42292.1

Annotation

6-exons
f-1
sp|F6HHV9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0127g00390#GO:0005576;GO:0005488;GO:0004650;GO:0005975;GO:0007047#2F2P1C
sp|E5GBI5_CUCME#Polygalacturonase#Cucumis melo subsp melo#unknown#GO:0005576;GO:0004650;GO:0005975;GO:0007047;GO:0006508#1F3P1C
Repeat List (scaffold4742)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42292.1	2	184	286	42.65	183	67	1e-69
Target_name	Start	End	Length	Cov(%)
sp\|F6HHV9_VITVI	826	1008	1111	16.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42292.1	4	184	286	40.9	181	65	2e-65
Target_name	Start	End	Length	Cov(%)
AT1G23460.1	183	363	460	39.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4742	Augustus	mRNA	13743	15649	.	+	.	ID=Dca42292.1;Parent=Dca42292
scaffold4742	Augustus	exon	13743	13778	.	+	.	ID=Dca42292.1.exon1;Parent=Dca42292.1
scaffold4742	Augustus	exon	13875	14082	.	+	.	ID=Dca42292.1.exon2;Parent=Dca42292.1
scaffold4742	Augustus	exon	14198	14279	.	+	.	ID=Dca42292.1.exon3;Parent=Dca42292.1
scaffold4742	Augustus	exon	14367	14475	.	+	.	ID=Dca42292.1.exon4;Parent=Dca42292.1
scaffold4742	Augustus	exon	14583	14699	.	+	.	ID=Dca42292.1.exon5;Parent=Dca42292.1
scaffold4742	Augustus	exon	15341	15649	.	+	.	ID=Dca42292.1.exon6;Parent=Dca42292.1