Carnation DB

Dca42367.1

Annotation

5-exons
f-1
sp|F6H3B4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g02540#GO:0005622;GO:0003676;GO:0008270#2F0P1C
sp|D9ZIU1_MALDO#C2H2L domain class transcription factor#Malus domestica (Apple) (Pyrus malus)#Name=C2H2L5#GO:0005622;GO:0008270#1F0P1C
Repeat List (scaffold476)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42367.1	1	409	409	69.43	409	69	2e-166
Target_name	Start	End	Length	Cov(%)
sp\|F6H3B4_VITVI	1	411	411	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42367.1	1	409	409	64.3	409	64	7e-141
Target_name	Start	End	Length	Cov(%)
AT4G31420.2	1	405	405	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold476	Augustus	mRNA	56975	60067	.	+	.	ID=Dca42367.1;Parent=Dca42367
scaffold476	Augustus	exon	56975	57079	.	+	.	ID=Dca42367.1.exon1;Parent=Dca42367.1
scaffold476	Augustus	exon	58514	59086	.	+	.	ID=Dca42367.1.exon2;Parent=Dca42367.1
scaffold476	Augus-PASA	exon	59292	59461	.	+	.	ID=Dca42367.1.exon3;Parent=Dca42367.1
scaffold476	Augus-PASA	exon	59594	59815	.	+	.	ID=Dca42367.1.exon4;Parent=Dca42367.1
scaffold476	Augus-PASA	exon	59908	60067	.	+	.	ID=Dca42367.1.exon5;Parent=Dca42367.1