Carnation DB

Dca4255.1

Annotation

6-exons
f-1
sp|A5B919_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002640#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os08t0125300-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold1158)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4255.1	3	1357	1557	45.6	1355	50	0
Target_name	Start	End	Length	Cov(%)
sp\|A5B919_VITVI	5	1395	1450	95.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4255.1	370	1352	1557	22.92	983	34	5e-151
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	361	1366	1428	70.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1158	Augustus	mRNA	62374	68649	.	-	.	ID=Dca4255.1;Parent=Dca4255
scaffold1158	Augustus	exon	62374	62601	.	-	.	ID=Dca4255.1.exon1;Parent=Dca4255.1
scaffold1158	Augustus	exon	62699	62829	.	-	.	ID=Dca4255.1.exon2;Parent=Dca4255.1
scaffold1158	Augustus	exon	62972	63159	.	-	.	ID=Dca4255.1.exon3;Parent=Dca4255.1
scaffold1158	Augustus	exon	63253	63325	.	-	.	ID=Dca4255.1.exon4;Parent=Dca4255.1
scaffold1158	Augustus	exon	64523	66355	.	-	.	ID=Dca4255.1.exon5;Parent=Dca4255.1
scaffold1158	Augustus	exon	66429	68649	.	-	.	ID=Dca4255.1.exon6;Parent=Dca4255.1